Statistically Optimum Optical Data Processing with Automatic Focus Estimation

The problem of optimally processing data with unknown focus is investigated. Optimum data processors are found by the method of maximum likelihood under a variety of assumptions that apply to most of the situations arising in practice. The unknown focus may be either an unknown parameter or an unknown random variable; the signal may be of known form or a random function; it is further assumed that the signal is received in additive, white, Gaussian noise. The problems of jointly estimating other unknown parameters and, in the case of a random signal, jointly estimating the signal, are also treated. The asymptotic variance and correlation of the estimators is discussed. Electrooptical realizations of the maximum likelihood computers are given. An iterative method of solution of the likelihood equation is also discussed. The discussion and results are directly applicable to the processing of synthetic aperture radar data.     

Sequence analysis of trimer isomers formed by montmorillonite catalysis in the reaction of binary monomer mixtures

Oligonucleotides are structurally similar to short RNA strands. Therefore, their formation via non-enzymatic reactions is highly relevant to Gilbert's RNA world scenario (1986) and the origin of life. In laboratory synthesis of oligonucleotides from monomers, it is necessary to remove the water molecules from the reaction medium to shift the equilibrium in favor of oligonucleotide formation, which would have been impossible for reactions that took place in dilute solutions on the early Earth. Model studies designed to address this problem demonstrate that montmorillonite, a phyllosilicate common on Earth and identified on Mars, efficiently catalyzes phosphodiester-bond formation between activated mononucleotides in dilute solutions and produces RNA-like oligomers. The purpose of this study was to examine the sequences and regiospecificity of trimer isomers formed in the reaction of 5'-phosphorimidazolides of adenosine and uridine. Results demonstrated that regiospecificity and sequence specificity observed in the dimer fractions are conserved in their elongation products. With regard to regiospecificity, 61% of the linkages were found to be RNA-like 3',5'-phosphodiester bonds. With regard to sequence specificity, we found that 88% of the linear trimers were hetero-isomers with 61% A-monomer and 39% U-monomer incorporation. These results lend support to Bernal's hypothesis that minerals may have played a significant role in the chemical processes that led to the origin of life by catalyzing the formation of phosphodiester bonds in RNA-like oligomers.     

Spectral signatures of photosynthesis. I. Review of Earth organisms

Why do plants reflect in the green and have a "red edge" in the red, and should extrasolar photosynthesis be the same? We provide (1) a brief review of how photosynthesis works, (2) an overview of the diversity of photosynthetic organisms, their light harvesting systems, and environmental ranges, (3) a synthesis of photosynthetic surface spectral signatures, and (4) evolutionary rationales for photosynthetic surface reflectance spectra with regard to utilization of photon energy and the planetary light environment. We found the "near-infrared (NIR) end" of the red edge to trend from blue-shifted to reddest for (in order) snow algae, temperate algae, lichens, mosses, aquatic plants, and finally terrestrial vascular plants. The red edge is weak or sloping in lichens. Purple bacteria exhibit possibly a sloping edge in the NIR. More studies are needed on pigment-protein complexes, membrane composition, and measurements of bacteria before firm conclusions can be drawn about the role of the NIR reflectance. Pigment absorbance features are strongly correlated with features of atmospheric spectral transmittance: P680 in Photosystem II with the peak surface incident photon flux density at approximately 685 nm, just before an oxygen band at 687.5 nm; the NIR end of the red edge with water absorbance bands and the oxygen A-band at 761 nm; and bacteriochlorophyll reaction center wavelengths with local maxima in atmospheric and water transmittance spectra. Given the surface incident photon flux density spectrum and resonance transfer in light harvesting, we propose some rules with regard to where photosynthetic pigments will peak in absorbance: (1) the wavelength of peak incident photon flux; (2) the longest available wavelength for core antenna or reaction center pigments; and (3) the shortest wavelengths within an atmospheric window for accessory pigments. That plants absorb less green light may not be an inefficient legacy of evolutionary history, but may actually satisfy the above criteria.     

Ultrastructural and geochemical characterization of Archean-Paleoproterozoic graphite particles: implications for recognizing traces of life in highly metamorphosed rocks

Abundant graphite particles occur in amphibolite-grade quartzite of the Archean-Paleoproterozoic Wutai Metamorphic Complex in the Wutaishan area of North China. Petrographic thin section observations suggest that the graphite particles occur within and between quartzite clasts and are heterogeneous in origin. Using HF maceration techniques, the Wutai graphite particles were extracted for further investigation. Laser Raman spectroscopic analysis of a population of extracted graphite discs indicated that they experienced a maximum metamorphic temperature of 513 +/- 50 degrees C, which is consistent with the metamorphic grade of the host rock and supports their indigenicity. Scanning and transmission electron microscopy revealed that the particles bear morphological features (such as hexagonal sheets of graphite crystals) related to metamorphism and crystal growth, but a small fraction of them (graphite discs) are characterized by a circular morphology, distinct marginal concentric folds, surficial wrinkles, and complex nanostructures. Ion microprobe analysis of individual graphite discs showed that their carbon isotope compositions range from -7.4 per thousand to -35.9 per thousand V-PDB (Vienna Pee Dee Belemnite), with an average of -20.3 per thousand, which is comparable to bulk analysis of extracted carbonaceous material. The range of their size, ultrastructures, and isotopic signatures suggests that the morphology and geochemistry of the Wutai graphite discs were overprinted by metamorphism and their ultimate carbon source probably had diverse origins that included abiotic processes. We considered both biotic and abiotic origins of the carbon source and graphite disc morphologies and cannot falsify the possibility that some circular graphite discs characterized by marginal folds and surficial wrinkles represent deflated, compressed, and subsequently graphitized organic-walled vesicles. Together with reports by other authors of acanthomorphic acritarchs from greenschist-amphibolite-grade metamorphic rocks, this study suggests that it is worthwhile to examine carbonaceous materials preserved in highly metamorphosed rocks for possible evidence of ancient life.     

A compact dopplergraph/magnetograph suitable for space-based measurements of solar oscillations and magnetic fields

A compact Dopplergraph/magnetograph placed in a continuous solar-viewing orbit will allow us to make major advancements in our understanding of solar internal structure and dynamics. An international program is currently being conducted at JPL and Mt. Wilson to develop such an instrument. By combining a unique magneto-optical resonance filter with CID and CCD cameras we have been able to obtain full- and partial-disk Dopplergrams and magnetograms. Time series of the velocity images are converted into k-ω power spectra which show clear- the solar nonradial p-mode oscillations. Magnetograms suitable for studying the long-term evolution of solar active regions have also been obtained with this instrument. A flight instrument based on this concept is being studied for possible inclusion in the SOHO mission.     

The Geology of Mercury: The View Prior to the MESSENGER Mission

Mariner 10 and Earth-based observations have revealed Mercury, the innermost of the terrestrial planetary bodies, to be an exciting laboratory for the study of Solar System geological processes. Mercury is characterized by a lunar-like surface, a global magnetic field, and an interior dominated by an iron core having a radius at least three-quarters of the radius of the planet. The 45% of the surface imaged by Mariner 10 reveals some distinctive differences from the Moon, however, with major contractional fault scarps and huge expanses of moderate-albedo Cayley-like smooth plains of uncertain origin. Our current image coverage of Mercury is comparable to that of telescopic photographs of the Earth’s Moon prior to the launch of Sputnik in 1957. We have no photographic images of one-half of the surface, the resolution of the images we do have is generally poor (∼1 km), and as with many lunar telescopic photographs, much of the available surface of Mercury is distorted by foreshortening due to viewing geometry, or poorly suited for geological analysis and impact-crater counting for age determinations because of high-Sun illumination conditions. Currently available topographic information is also very limited. Nonetheless, Mercury is a geological laboratory that represents (1) a planet where the presence of a huge iron core may be due to impact stripping of the crust and upper mantle, or alternatively, where formation of a huge core may have resulted in a residual mantle and crust of potentially unusual composition and structure; (2) a planet with an internal chemical and mechanical structure that provides new insights into planetary thermal history and the relative roles of conduction and convection in planetary heat loss; (3) a one-tectonic-plate planet where constraints on major interior processes can be deduced from the geology of the global tectonic system; (4) a planet where volcanic resurfacing may not have played a significant role in planetary history and internally generated volcanic resurfacing may have ceased at ∼3.8 Ga; (5) a planet where impact craters can be used to disentangle the fundamental roles of gravity and mean impactor velocity in determining impact crater morphology and morphometry; (6) an environment where global impact crater counts can test fundamental concepts of the distribution of impactor populations in space and time; (7) an extreme environment in which highly radar-reflective polar deposits, much more extensive than those on the Moon, can be better understood; (8) an extreme environment in which the basic processes of space weathering can be further deduced; and (9) a potential end-member in terrestrial planetary body geological evolution in which the relationships of internal and surface evolution can be clearly assessed from both a tectonic and volcanic point of view. In the half-century since the launch of Sputnik, more than 30 spacecraft have been sent to the Moon, yet only now is a second spacecraft en route to Mercury. The MESSENGER mission will address key questions about the geologic evolution of Mercury; the depth and breadth of the MESSENGER data will permit the confident reconstruction of the geological history and thermal evolution of Mercury using new imaging, topography, chemistry, mineralogy, gravity, magnetic, and environmental data.     

The Magnetic Field Pile-up and Density Depletion in the Martian Magnetosheath: A Comparison with the Plasma Depletion Layer Upstream of the Earth's Magnetopause

Using magnetometer and electron observations from the Mars Global Surveyor (MGS) and the Wind spacecraft we show that the region of magnetic field pile-up and density decrease located between the Martian ionosphere and bow shock exhibit strong similarities with the plasma depletion layer (PDL) observed upstream of the Earth's magnetopause in the absence of magnetic reconnection when the magnetopause is a solid obstacle in the solar wind. A PDL is formed upstream of the terrestrial magnetopause when the magnetic field piles up against the obstacle and particles in the pile-up region are squeezed away from the high magnetic pressure region along the field lines as the flux tubes convect toward the magnetopause. We here discuss the possibility that at least part of the region of magnetic field pile-up and density depletion upstream of Mars may be formed by the same physical processes which generate the PDL upstream of the Earth's magnetopause. More complete ion, electron, and neutral measurements are needed to conclusively determine the relative importance of the plasma depletion process versus exospheric processes.